Direct REST API access to UniProt. Protein searches, FASTA retrieval, ID mapping, Swiss-Prot/TrEMBL. For Python...
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17,525 skills
Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions,...
Access ZINC (230M+ purchasable compounds). Search by ZINC ID/SMILES, similarity searches, 3D-ready structures for...
Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API,...
DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows,...
Electronic lab notebook API integration. Access notebooks, manage entries/attachments, backup notebooks, integrate...
Latch platform for bioinformatics workflows. Build pipelines with Latch SDK, @workflow/@task decorators, deploy...
Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage...
Lab automation platform for Flex/OT-2 robots. Write Protocol API v2 protocols, liquid handling, hardware modules...
Integration with protocols.io API for managing scientific protocols. This skill should be used when working with...
This skill should be used for time series machine learning tasks including classification, regression, clustering,...
This skill should be used when working with annotated data matrices in Python, particularly for single-cell genomics...
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use...
Comprehensive Python library for astronomy and astrophysics. This skill should be used when working with...
Autonomous biomedical AI agent framework for executing complex research tasks across genomics, drug discovery,...
Primary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence...
Primary Python tool for 40+ bioinformatics services. Preferred for multi-database workflows: UniProt, KEGG, ChEMBL,...
Query CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, integrate with...
Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems...
Parallel/distributed computing. Scale pandas/NumPy beyond memory, parallel DataFrames/Arrays, multi-file processing,...
Work with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use...
Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug...
Molecular machine learning toolkit. Property prediction (ADMET, toxicity), GNNs (GCN, MPNN), MoleculeNet benchmarks,...
NGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks),...