Unified Python interface to 40+ bioinformatics services. Use when querying multiple databases (UniProt, KEGG,...
find ~/K-Dense-AI/ -name "*.skill"
Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation...
Python library for working with geospatial vector data including shapefiles, GeoJSON, and GeoPackage files. Use when...
Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR...
Access COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene...
Comprehensive healthcare AI toolkit for developing, testing, and deploying machine learning models with clinical...
Fast CLI/Python queries to 20+ bioinformatics databases. Use for quick lookups: gene info, BLAST searches, AlphaFold...
Materials science toolkit. Crystal structures (CIF, POSCAR), phase diagrams, band structure, DOS, Materials Project...
This skill should be used for time series machine learning tasks including classification, regression, clustering,...
Multi-objective optimization framework. NSGA-II, NSGA-III, MOEA/D, Pareto fronts, constraint handling, benchmarks...
Query NHGRI-EBI GWAS Catalog for SNP-trait associations. Search variants by rs ID, disease/trait, gene, retrieve...
Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions,...
Work with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use...
Access Human Metabolome Database (220K+ metabolites). Search by name/ID/structure, retrieve chemical properties,...
Cloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing...
Access AlphaFold 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files,...
Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API,...
Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract...
Access and analyze comprehensive drug information from the DrugBank database including drug properties,...
MATLAB and GNU Octave numerical computing for matrix operations, data analysis, visualization, and scientific...