Access AlphaFold's 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, analyze confidence metrics (pLDDT, PAE), for drug discovery and structural biology.

Molecular machine learning toolkit. Property prediction (ADMET, toxicity), GNNs (GCN, MPNN), MoleculeNet benchmarks, pretrained models, featurization, for drug discovery ML.

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Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

Comprehensive healthcare AI toolkit for developing, testing, and deploying machine learning models with clinical data. This skill should be used when working with electronic health records (EHR),...

Model interpretability and explainability using SHAP (SHapley Additive exPlanations). Use this skill when explaining machine learning model predictions, computing feature importance, generating...

Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug discovery: SMILES parsing, standardization, descriptors, fingerprints, clustering, 3D...

Materials science toolkit. Crystal structures (CIF, POSCAR), phase diagrams, band structure, DOS, Materials Project integration, format conversion, for computational materials science.

Chunked N-D arrays for cloud storage. Compressed arrays, parallel I/O, S3/GCS integration, NumPy/Dask/Xarray compatible, for large-scale scientific computing pipelines.

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Complete design system with principles + living style guide. Enforces precise, crafted UI inspired by Linear, Notion, and Stripe. Includes boilerplate style-guide page template for Next.js/React...

This skill should be used when the user asks to "research code", "how does X work", "where is Y defined", "who calls Z", "trace code flow", "find usages", "review a PR", "explore this library",...

Create distinctive, production-grade frontend interfaces with high design quality. Use this skill when the user asks to build web components, pages, or applications. Generates creative, polished...

Guide for using Microsoft MarkItDown - a Python utility for converting files to Markdown. Use when converting PDF, Word, PowerPoint, Excel, images, audio, HTML, CSV, JSON, XML, ZIP, YouTube URLs,...

Browser automation via Puppeteer CLI scripts (JSON output). Capabilities: screenshots, PDF generation, web scraping, form automation, network monitoring, performance profiling, JavaScript...

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Convert tasks to GitHub Issues for project tracking

SKILL.md for jira-snowflake-github workflow