Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.
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ai-music-generation
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ai-image-generation
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autonomous-agents
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Autonomous agents are AI systems that can independently decompose goals, plan actions, execute tools, and self-correct without constant human guidance. The challenge isn't making them capable -...
ai-video-generation
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Research-powered creative strategy with visual previews. Use when you need to figure out WHAT to create before creating it. Researches competitors, captures references, generates visual direction...
深度集成 Gitee MCP，实现 Issue 管理、PR 自动化提交、代码审查和版本发布的全流程自动化。
pubmed-database
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Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct...
game-tools-workflows
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ai-cost-optimizer
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Master of LLM Economic Orchestration, specialized in Google GenAI (Gemini 3), Context Caching, and High-Fidelity Token Engineering.
Orchestrate comprehensive planning phase from ideation to development-ready specifications using 4 specialized agents
kegg-database
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Direct REST API access to KEGG (academic use only). Pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion. For Python workflows with multiple databases,...
pyopenms
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Complete mass spectrometry analysis platform. Use for proteomics workflows feature detection, peptide identification, protein quantification, and complex LC-MS/MS pipelines. Supports extensive...
FOLLOW THE STATE MACHINE IN SKILL.MD. When user says 'continue': (1) FIRST: Run pwd, (2) Announce STATE: CHECK_STATUS, (3) Read .claude/session.md to check Status field, (4) Route based on Status....
bioservices
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Unified Python interface to 40+ bioinformatics services. Use when querying multiple databases (UniProt, KEGG, ChEMBL, Reactome) in a single workflow with consistent API. Best for cross-database...
gget
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Fast CLI/Python queries to 20+ bioinformatics databases. Use for quick lookups: gene info, BLAST searches, AlphaFold structures, enrichment analysis. Best for interactive exploration, simple...
pylabrobot
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Vendor-agnostic lab automation framework. Use when controlling multiple equipment types (Hamilton, Tecan, Opentrons, plate readers, pumps) or needing unified programming across different vendors....
dask
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Distributed computing for larger-than-RAM pandas/NumPy workflows. Use when you need to scale existing pandas/NumPy code beyond memory or across clusters. Best for parallel file processing,...
scanpy
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Standard single-cell RNA-seq analysis pipeline. Use for QC, normalization, dimensionality reduction (PCA/UMAP/t-SNE), clustering, differential expression, and visualization. Best for exploratory...
deepchem
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Molecular ML with diverse featurizers and pre-built datasets. Use for property prediction (ADMET, toxicity) with traditional ML or GNNs when you want extensive featurization options and...