Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
Estimate GPU memory usage for Megatron-based MoE (Mixture of Experts) and dense models. Use when users need to (1) estimate memory from HuggingFace model configs (DeepSeek-V3, Qwen, etc.), (2)...
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to...
Automates browser interactions for web testing, form filling, screenshots, and data extraction. Use when the user needs to navigate websites, interact with web pages, fill forms, take screenshots,...
Automates browser interactions for web testing, form filling, screenshots, and data extraction. Use when the user needs to navigate websites, interact with web pages, fill forms, take screenshots,...
Guarantee valid JSON/XML/code structure during generation, use Pydantic models for type-safe outputs, support local models (Transformers, vLLM), and maximize inference speed with Outlines -...
Guarantee valid JSON/XML/code structure during generation, use Pydantic models for type-safe outputs, support local models (Transformers, vLLM), and maximize inference speed with Outlines -...
Official Opentrons Protocol API for OT-2 and Flex robots. Use when writing protocols specifically for Opentrons hardware with full access to Protocol API v2 features. Best for production Opentrons...
Static Application Security Testing orchestration skill for running and managing SAST tools across codebases. This skill should be used when performing static code analysis, writing custom...
Use when building command-line interface tools; when choosing argument parsing libraries; when handling stdin/stdout/stderr patterns; when implementing subcommands; when tests for CLI apps fail or...
Query Reactome REST API for pathway analysis, enrichment, gene-pathway mapping, disease pathways, molecular interactions, expression analysis, for systems biology studies.
Upgrade any skill to v5 Hybrid format using decision theory + modal logic
Upgrade any skill to v5 Hybrid format using decision theory + modal logic
Statistical visualization with pandas integration. Use for quick exploration of distributions, relationships, and categorical comparisons with attractive defaults. Best for box plots, violin...
Create interactive Sankey diagrams for flow visualization from CSV, DataFrame, or dict data. Supports node/link styling and HTML/PNG/SVG export.
Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.
Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.
Validate code quality, test coverage, performance, and security. Use
Lightweight Linear skill for fetching issue details. Returns only essential data (title, description, state, assignee) to optimize context usage compared to full Linear MCP.
Molecular featurization for ML (100+ featurizers). ECFP, MACCS, descriptors, pretrained models (ChemBERTa), convert SMILES to features, for QSAR and molecular ML.