Apply STRIDE methodology to systematically identify threats. Use when analyzing system security, conducting threat modeling sessions, or creating security documentation.
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Apply STRIDE methodology to systematically identify threats. Use when analyzing system security, conducting threat modeling sessions, or creating security documentation.
plan-gap-analysis
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Analyze gaps between implementation plans and actual codebase implementation for the Rust self-learning memory project
survey-data-analysis
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问卷调查报告数据分析技能，支持自动选择分析模型、生成数据分析报告、评估旧方案并给出改进意见，最终生成HTML报告并在浏览器中打开
reactome-database
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Query Reactome REST API for pathway analysis, enrichment, gene-pathway mapping, disease pathways, molecular interactions, expression analysis, for systems biology studies.
scikit-bio
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Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis.
pydeseq2
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Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.
gtars
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High-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regions, BED files, coverage tracks, overlap detection, tokenization for ML...
anndata
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Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill—for analysis workflows use...
scanpy
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Standard single-cell RNA-seq analysis pipeline. Use for QC, normalization, dimensionality reduction (PCA/UMAP/t-SNE), clustering, differential expression, and visualization. Best for exploratory...
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This skill should be used when the user asks to "分析中国政策", "评估政策落地可能性", "判断政策执行力度", "预判政策走向", "解读政策文件", or needs systematic framework to analyze Chinese government policy implementation likelihood,...
vuln-analysis-expert
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WooYun漏洞分析专家系统。基于88,636个真实漏洞案例提炼的元思考方法论、测试流程、利用技巧、绕过方法。覆盖SQL注入、XSS、命令执行、逻辑漏洞、文件上传、未授权访问等主要漏洞类型。当用户进行漏洞挖掘、渗透测试、安全审计、代码审计时触发。
geniml
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This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec, BEDspace), single-cell ATAC-seq analysis...
geopandas
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Python library for working with geospatial vector data including shapefiles, GeoJSON, and GeoPackage files. Use when working with geographic data for spatial analysis, geometric operations,...
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“Inspect a failed Bauplan pipeline run on a dev branch, reconstruct the frozen data state, collect evidence, propose a minimal code fix using Git, and rerun deterministically where possible.”
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research
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Technical research methodology with YAGNI/KISS/DRY principles. Phases: scope definition, information gathering, analysis, synthesis, recommendation. Capabilities: technology evaluation,...
cobrapy
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Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.