Access Human Metabolome Database (220K+ metabolites). Search by name/ID/structure, retrieve chemical properties,...
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15,688 skills
Direct REST API access to KEGG (academic use only). Pathway analysis, gene-pathway mapping, metabolic pathways, drug...
Access NIH Metabolomics Workbench via REST API (4,200+ studies). Query metabolites, RefMet nomenclature, MS/NMR...
Query Open Targets Platform for target-disease associations, drug target discovery, tractability/safety data,...
Access RCSB PDB for 3D protein/nucleic acid structures. Search by text/sequence/structure, download coordinates...
Query PubChem via PUG-REST API/PubChemPy (110M+ compounds). Search by name/CID/SMILES, retrieve properties,...
Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation...
Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG...
Direct REST API access to UniProt. Protein searches, FASTA retrieval, ID mapping, Swiss-Prot/TrEMBL. For Python...
Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions,...
Access ZINC (230M+ purchasable compounds). Search by ZINC ID/SMILES, similarity searches, 3D-ready structures for...
Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API,...
DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows,...
Electronic lab notebook API integration. Access notebooks, manage entries/attachments, backup notebooks, integrate...
Latch platform for bioinformatics workflows. Build pipelines with Latch SDK, @workflow/@task decorators, deploy...
Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage...
Lab automation platform for Flex/OT-2 robots. Write Protocol API v2 protocols, liquid handling, hardware modules...
Integration with protocols.io API for managing scientific protocols. This skill should be used when working with...
This skill should be used for time series machine learning tasks including classification, regression, clustering,...
This skill should be used when working with annotated data matrices in Python, particularly for single-cell genomics...
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use...
Comprehensive Python library for astronomy and astrophysics. This skill should be used when working with...
Autonomous biomedical AI agent framework for executing complex research tasks across genomics, drug discovery,...
Primary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence...