Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage...
AI & LLM
LLM integrations, prompt engineering, and AI orchestration
8,758 技能
Lab automation platform for Flex/OT-2 robots. Write Protocol API v2 protocols, liquid handling, hardware modules...
Integration with protocols.io API for managing scientific protocols. This skill should be used when working with...
This skill should be used for time series machine learning tasks including classification, regression, clustering,...
This skill should be used when working with annotated data matrices in Python, particularly for single-cell genomics...
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use...
Comprehensive Python library for astronomy and astrophysics. This skill should be used when working with...
Autonomous biomedical AI agent framework for executing complex research tasks across genomics, drug discovery,...
Primary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence...
Primary Python tool for 40+ bioinformatics services. Preferred for multi-database workflows: UniProt, KEGG, ChEMBL,...
Query CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, integrate with...
Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems...
Parallel/distributed computing. Scale pandas/NumPy beyond memory, parallel DataFrames/Arrays, multi-file processing,...
Work with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use...
Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug...
Molecular machine learning toolkit. Property prediction (ADMET, toxicity), GNNs (GCN, MPNN), MoleculeNet benchmarks,...
NGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks),...
Multiagent AI system for scientific research assistance that automates research workflows from data analysis to...
Diffusion-based molecular docking. Predict protein-ligand binding poses from PDB/SMILES, confidence scores, virtual...
Comprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across...
Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy,...
Parse FCS (Flow Cytometry Standard) files v2.0-3.1. Extract events as NumPy arrays, read metadata/channels, convert...
This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for...
CLI/Python toolkit for rapid bioinformatics queries. Preferred for quick BLAST searches. Access to 20+ databases:...