cat ~/热门

pyhealth @jackspace

Comprehensive healthcare AI toolkit for developing, testing, and deploying machine learning models with clinical...

pylabrobot @jackspace

Laboratory automation toolkit for controlling liquid handlers, plate readers, pumps, heater shakers, incubators,...

pymatgen @jackspace

Materials science toolkit. Crystal structures (CIF, POSCAR), phase diagrams, band structure, DOS, Materials Project...

pymc-bayesian-modeling @jackspace

Bayesian modeling with PyMC. Build hierarchical models, MCMC (NUTS), variational inference, LOO/WAIC comparison,...

pymoo @jackspace

Multi-objective optimization framework. NSGA-II, NSGA-III, MOEA/D, Pareto fronts, constraint handling, benchmarks...

pyopenms @jackspace

Python interface to OpenMS for mass spectrometry data analysis. Use for LC-MS/MS proteomics and metabolomics...

pysam @jackspace

Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions,...

pytdc @jackspace

Therapeutics Data Commons. AI-ready drug discovery datasets (ADME, toxicity, DTI), benchmarks, scaffold splits,...

pytorch-lightning @jackspace

Deep learning framework (PyTorch Lightning). Organize PyTorch code into LightningModules, configure Trainers for...

rdkit @jackspace

Cheminformatics toolkit for fine-grained molecular control. SMILES/SDF parsing, descriptors (MW, LogP, TPSA),...

reportlab @jackspace

PDF generation toolkit. Create invoices, reports, certificates, forms, charts, tables, barcodes, QR codes,...

scanpy @jackspace

Single-cell RNA-seq analysis. Load .h5ad/10X data, QC, normalization, PCA/UMAP/t-SNE, Leiden clustering, marker...

scikit-bio @jackspace

Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac),...

scikit-learn @jackspace

Machine learning in Python with scikit-learn. Use when working with supervised learning (classification,...

scikit-survival @jackspace

Comprehensive toolkit for survival analysis and time-to-event modeling in Python using scikit-survival. Use this...

scvi-tools @jackspace

This skill should be used when working with single-cell omics data analysis using scvi-tools, including scRNA-seq,...

seaborn @jackspace

Statistical visualization. Scatter, box, violin, heatmaps, pair plots, regression, correlation matrices, KDE,...

shap @jackspace

Model interpretability and explainability using SHAP (SHapley Additive exPlanations). Use this skill when explaining...

simpy @jackspace

Process-based discrete-event simulation framework in Python. Use this skill when building simulations of systems...

stable-baselines3 @jackspace

Use this skill for reinforcement learning tasks including training RL agents (PPO, SAC, DQN, TD3, DDPG, A2C, etc.),...

statsmodels @jackspace

Statistical modeling toolkit. OLS, GLM, logistic, ARIMA, time series, hypothesis tests, diagnostics, AIC/BIC, for...

sympy @jackspace

Use this skill when working with symbolic mathematics in Python. This skill should be used for symbolic computation...

tooluniverse @jackspace

Use this skill when working with scientific research tools and workflows across bioinformatics, cheminformatics,...

torch-geometric @jackspace

Graph Neural Networks (PyG). Node/graph classification, link prediction, GCN, GAT, GraphSAGE, heterogeneous graphs,...